Yangyang Li

Genomic language model mitigates chimera artifacts in nanopore direct RNA sequencing featured image
Nanopore

Genomic language model mitigates chimera artifacts in nanopore direct RNA sequencing

DeepChopper is a genomic language model that removes nanopore dRNA-seq chimera artifacts from base-called reads with single-base precision, enhancing transcript annotation and gene …

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OctopuSV and TentacleSV: a one-stop toolkit for multi-sample, cross-platform structural variant comparison and analysis featured image
Structural Variants

OctopuSV and TentacleSV: a one-stop toolkit for multi-sample, cross-platform structural variant comparison and analysis

OctopuSV standardizes ambiguous BNDs and enables advanced multi-sample SV set operations; TentacleSV provides an end-to-end automated SV analysis pipeline from raw reads to …

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Qingxiang (Allen) Guo
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