OctopuSV standardizes ambiguous BNDs and enables advanced multi-sample SV set operations; TentacleSV provides an end-to-end automated SV analysis pipeline from raw reads to …
DeepChopper is a genomic language model that removes nanopore dRNA-seq chimera artifacts from base-called reads (no raw signal or alignment needed), improving transcript annotation …
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ScanNeo2 is a fully automated pipeline for high-throughput neoantigen prediction from raw sequencing data, integrating diverse somatic alterations beyond SNVs/indels (e.g., …
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